Basic Statistics
Measure | Value |
---|---|
Filename | dataset_1_Tet1_WT_Replicate_R1_Mus_musculus_RNA-Seq_1_val_1.fq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 36691023 |
Total Bases | 3.5 Gbp |
Sequences flagged as poor quality | 0 |
Sequence length | 20-100 |
%GC | 49 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CTCCGTTCTCGCCCTCGCTCTCCCTCCACACAAGCCGGAGGGTGCGCGGC | 98322 | 0.2679729044349622 | No Hit |
CCCGAGTGTCCGGGCCCCCCGCCCCACCGG | 65074 | 0.17735673382560088 | No Hit |
CCCGAGTGTCCGGGCCCCCCGCCCCACCGGGGGCCCGCTGGTTCCTCCCG | 50161 | 0.1367119145192545 | No Hit |
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAATGGACCTTG | 45678 | 0.12449366702040443 | No Hit |
CCCGGGACAGGAGCGGGGAGGACACGCGAGGCCAGAAAAGCGTGGCATCG | 40253 | 0.10970803403328383 | No Hit |